BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013A03LP1|AL426443
(859 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1633 1689 0.0
>3x_Contig1633
Length = 12594
Score = 1689 bits (852), Expect = 0.0
Identities = 859/860 (99%), Gaps = 1/860 (0%)
Strand = Plus / Plus
Query: 1 tttcccagcactgctaatccaaagtccggctaccgttggaatctcttcgagacttcgcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5291 tttcccagcactgctaatccaaagtccggctaccgttggaatctcttcgagacttcgcac 5350
Query: 61 ccattaacgtcatttaccacgattgaccggccggaacg-tttaccaggacgtccatgatc 119
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 5351 ccattaacgtcatttaccacgattgaccggccggaacgctttaccaggacgtccatgatc 5410
Query: 120 cggccgaaattggaccatctttaccaacccagagactgacgcagtttcaaccatagtact 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5411 cggccgaaattggaccatctttaccaacccagagactgacgcagtttcaaccatagtact 5470
Query: 180 ctgctctgaatcctaatgtccttctatacccatcctttgggcacccaatccaaagatcat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5471 ctgctctgaatcctaatgtccttctatacccatcctttgggcacccaatccaaagatcat 5530
Query: 240 ctttaactagaggtgacgtgcgccgccagacggcaattcggtctctaccataaggcaacc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5531 ctttaactagaggtgacgtgcgccgccagacggcaattcggtctctaccataaggcaacc 5590
Query: 300 aattccccaccacgtaagtacgcgtttgcctacctttttctttgagtatttacacgtttt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5591 aattccccaccacgtaagtacgcgtttgcctacctttttctttgagtatttacacgtttt 5650
Query: 360 tttccctctcctttgtgtattctttctgataattccgttcgacagaattcttcttagaag 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5651 tttccctctcctttgtgtattctttctgataattccgttcgacagaattcttcttagaag 5710
Query: 420 cagcagaagaacggcaggaaaagctcattgcatgaaacagaacgttaggttattgtaatg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5711 cagcagaagaacggcaggaaaagctcattgcatgaaacagaacgttaggttattgtaatg 5770
Query: 480 atacaggtgctttactaattgagttcaaaagaaattctttttttgtattatgcttatgtg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5771 atacaggtgctttactaattgagttcaaaagaaattctttttttgtattatgcttatgtg 5830
Query: 540 tatatcaaccctatttaccgatgctcgttcctagtcatcctaagtaaccatcaatacttg 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5831 tatatcaaccctatttaccgatgctcgttcctagtcatcctaagtaaccatcaatacttg 5890
Query: 600 aaaatctacaaaatgataaaatcaggtctctttgttatggttttctggatttctttttgc 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5891 aaaatctacaaaatgataaaatcaggtctctttgttatggttttctggatttctttttgc 5950
Query: 660 cgattctgtttaaacattatataagtatatgtcattacaaatctgaacacagtacaaata 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5951 cgattctgtttaaacattatataagtatatgtcattacaaatctgaacacagtacaaata 6010
Query: 720 tgagtttcaggatttattattatgtcaattgatgcaaatgtataaaagaaagtgccaggg 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6011 tgagtttcaggatttattattatgtcaattgatgcaaatgtataaaagaaagtgccaggg 6070
Query: 780 atccaactagtagctgaaagtgagagaaatagttggtttatatatatatttttctttttc 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6071 atccaactagtagctgaaagtgagagaaatagttggtttatatatatatttttctttttc 6130
Query: 840 ggtttgatcaatttgggttg 859
||||||||||||||||||||
Sbjct: 6131 ggtttgatcaatttgggttg 6150
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9688
Number of Sequences: 1807
Number of extensions: 9688
Number of successful extensions: 59
Number of sequences better than 1.0e-20: 1
length of query: 859
length of database: 10,358,551
effective HSP length: 16
effective length of query: 843
effective length of database: 10,329,639
effective search space: 8707885677
effective search space used: 8707885677
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)